We begin by reviewing a technique to approximate the dynamics of stochastic programs --written in a stochastic process algebra-- by a hybrid system, suitable to capture a mixed discrete/continuous evolution. In a nutshell, the discrete dynamics is kept stochastic while the continuous evolution is given in terms of ODEs, and the overall technique, therefore, naturally associates a Piecewise Deterministic Markov Process with a stochastic program. The specific contribution in this work consists in an increase of the flexibility of the translation scheme, obtained by allowing a dynamic reconfiguration of the degree of discreteness/continuity of the semantics. We also discuss the relationships of this approach with other hybrid simulation strategies for biochemical systems.
Hybrid Semantics of Stochastic Programs with Dynamic Reconfiguration / Bortolussi, Luca; Alberto, P.. - In: ELECTRONIC PROCEEDINGS IN THEORETICAL COMPUTER SCIENCE. - ISSN 2075-2180. - ELETTRONICO. - 6:(2009), pp. 63-76. ( Second International Workshop on} Computational Models for Cell Processes Eindhoven, the Netherlands November 3, 2009) [10.4204/EPTCS.6.5].
Hybrid Semantics of Stochastic Programs with Dynamic Reconfiguration.
BORTOLUSSI, LUCA;
2009-01-01
Abstract
We begin by reviewing a technique to approximate the dynamics of stochastic programs --written in a stochastic process algebra-- by a hybrid system, suitable to capture a mixed discrete/continuous evolution. In a nutshell, the discrete dynamics is kept stochastic while the continuous evolution is given in terms of ODEs, and the overall technique, therefore, naturally associates a Piecewise Deterministic Markov Process with a stochastic program. The specific contribution in this work consists in an increase of the flexibility of the translation scheme, obtained by allowing a dynamic reconfiguration of the degree of discreteness/continuity of the semantics. We also discuss the relationships of this approach with other hybrid simulation strategies for biochemical systems.Pubblicazioni consigliate
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